AT1G20823


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G20823
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g15080 Os02g0248900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_114175g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_12188g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_26001g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
MA_373963g0010 No alias No description available 0.02 Gene family
MA_816764g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_904294g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d030945 GRMZM2G124423 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0010200 response to chitin IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 110 153
No external refs found!