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  5. Nbi_g10299

Nbi_g10299


Description : not classified & original description: none


Gene families : OG0004536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10299

Target Alias Description ECC score Gene Family Method Actions
Adi_g058547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085810 PAB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124504 PAB2, PABP2, ATPAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02542 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428990g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_139106g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8923g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 195 256
IPR000504 RRM_dom 92 157
IPR000504 RRM_dom 13 82
IPR041337 hnRNP_Q_AcD 323 391
No external refs found!