AT1G19850 (MP, IAA24, ARF5)


Aliases : MP, IAA24, ARF5

Description : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G19850
Cluster HCCA cluster: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.03 Gene family
LOC_Os04g43910 Os04g0519700 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
LOC_Os05g48870 Os05g0563400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
LOC_Os11g32110 Os11g0523800 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_169311g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc08g008380.3.1 Solyc08g008380.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc08g082630.3.1 Solyc08g082630.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d002929 GRMZM5G808366 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d011953 GRMZM2G116557 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Zm00001d014507 GRMZM2G013663 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.06 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d043922 GRMZM2G437460 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity TAS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006346 methylation-dependent chromatin silencing RCA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated IEP Arabidopsis.org
BP GO:0007155 cell adhesion RCA Arabidopsis.org
BP GO:0009733 response to auxin IEP Arabidopsis.org
BP GO:0009733 response to auxin RCA Arabidopsis.org
BP GO:0009741 response to brassinosteroid RCA Arabidopsis.org
BP GO:0009855 determination of bilateral symmetry RCA Arabidopsis.org
BP GO:0009886 post-embryonic animal morphogenesis RCA Arabidopsis.org
BP GO:0009887 animal organ morphogenesis RCA Arabidopsis.org
BP GO:0009908 flower development IGI Arabidopsis.org
BP GO:0009909 regulation of flower development RCA Arabidopsis.org
BP GO:0009942 longitudinal axis specification IMP Arabidopsis.org
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010014 meristem initiation RCA Arabidopsis.org
BP GO:0010051 xylem and phloem pattern formation IMP Arabidopsis.org
BP GO:0010051 xylem and phloem pattern formation RCA Arabidopsis.org
BP GO:0010073 meristem maintenance RCA Arabidopsis.org
BP GO:0010090 trichome morphogenesis RCA Arabidopsis.org
BP GO:0010305 leaf vascular tissue pattern formation IGI Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0016246 RNA interference RCA Arabidopsis.org
BP GO:0031048 chromatin silencing by small RNA RCA Arabidopsis.org
MF GO:0042802 identical protein binding IPI Arabidopsis.org
MF GO:0044212 transcription regulatory region DNA binding IDA Arabidopsis.org
BP GO:0045010 actin nucleation RCA Arabidopsis.org
BP GO:0048364 root development IGI Arabidopsis.org
BP GO:0048439 flower morphogenesis RCA Arabidopsis.org
BP GO:0048481 plant ovule development RCA Arabidopsis.org
BP GO:0048507 meristem development IGI Arabidopsis.org
BP GO:0048507 meristem development RCA Arabidopsis.org
BP GO:0048519 negative regulation of biological process RCA Arabidopsis.org
BP GO:0048527 lateral root development RCA Arabidopsis.org
BP GO:0048765 root hair cell differentiation RCA Arabidopsis.org
BP GO:0051567 histone H3-K9 methylation RCA Arabidopsis.org
BP GO:0071555 cell wall organization RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 158 259
IPR010525 Auxin_resp 284 367
IPR033389 AUX/IAA_dom 785 879
No external refs found!