AT1G19210


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G19210
Cluster HCCA cluster: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01013935001 No alias No description available 0.04 Gene family
GSVIVT01026334001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g58420 Os01g0797600 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os02g51670 Os02g0752800 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.06 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.02 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10436654g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_225124g0010 No alias No description available 0.03 Gene family
MA_4032g0010 No alias No description available 0.06 Gene family
MA_463250g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_540404g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_6305g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_66742g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_67707g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_7168929g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.03 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.02 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.02 Gene family
Solyc06g054630.2.1 Solyc06g054630.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.06 Gene family
Solyc08g078190.1.1 Solyc08g078190.1 No description available 0.04 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.03 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.05 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.04 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.03 Gene family
Solyc12g009240.1.1 Solyc12g009240.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.03 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.02 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.03 Gene family
Zm00001d027929 No alias No description available 0.04 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d045120 GRMZM2G156006 17.5.2 hormone metabolism.ethylene.signal transduction... 0.05 Gene family
Zm00001d048208 GRMZM2G113060 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0010200 response to chitin RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 10 60
No external refs found!