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  5. AT1G05520

AT1G05520


Description : Sec23/Sec24 protein transport family protein


Gene families : OG_01_0001193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001193_tree ,
OG_02_0001066 (LandPlants) Phylogenetic Tree(s): OG_02_0001066_tree ,
OG_03_0002598 (SeedPlants) Phylogenetic Tree(s): OG_03_0002598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05520
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
Cpa|evm.model.tig00001408.15 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.08 Archaeplastida
LOC_Os11g24560.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.08 Archaeplastida
MA_10427000g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp2g15530.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.09 Archaeplastida
Pp3c10_18520V3.1 No alias Sec23/Sec24 protein transport family protein 0.04 Archaeplastida
Pp3c13_1360V3.1 No alias Sec23/Sec24 protein transport family protein 0.02 Archaeplastida
Pp3c6_940V3.1 No alias Sec23/Sec24 protein transport family protein 0.04 Archaeplastida
Smo107900 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Smo168140 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 Archaeplastida
Zm00001e008888_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.11 Archaeplastida
Zm00001e009959_P002 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 Archaeplastida
Zm00001e021415_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.16 Archaeplastida
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 LandPlants
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 LandPlants
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 LandPlants
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.08 LandPlants
LOC_Os11g24560.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.07 LandPlants
MA_10427000g0010 No alias no hits & (original description: none) 0.05 LandPlants
Mp2g15530.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 LandPlants
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.09 LandPlants
Pp3c10_18520V3.1 No alias Sec23/Sec24 protein transport family protein 0.04 LandPlants
Pp3c13_1360V3.1 No alias Sec23/Sec24 protein transport family protein 0.02 LandPlants
Pp3c3_29390V3.1 No alias Sec23/Sec24 protein transport family protein 0.02 LandPlants
Pp3c6_940V3.1 No alias Sec23/Sec24 protein transport family protein 0.03 LandPlants
Smo107900 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 LandPlants
Smo168140 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 LandPlants
Solyc09g092680.4.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 LandPlants
Zm00001e008888_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.1 LandPlants
Zm00001e009959_P002 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 LandPlants
Zm00001e021415_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.16 LandPlants
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 SeedPlants
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 SeedPlants
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 SeedPlants
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.07 SeedPlants
LOC_Os08g36994.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 SeedPlants
LOC_Os11g24560.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.07 SeedPlants
MA_10427000g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e009959_P002 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 SeedPlants
Zm00001e021415_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.15 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006810 transport ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012990 Sec23_24_beta_S 421 525
IPR006895 Znf_Sec23_Sec24 56 94
IPR006900 Sec23/24_helical_dom 539 635
IPR006896 Sec23/24_trunk_dom 139 410
IPR007123 Gelsolin-like_dom 651 739
No external refs found!