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  5. Nbi_g10101

Nbi_g10101 (TUA3)


Aliases : TUA3

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000012 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10101

Target Alias Description ECC score Gene Family Method Actions
Aev_g20660 TUA6 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g05333 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Als_g26512 TOR2, TUA4 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Als_g38600 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
Als_g47452 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Aob_g03148 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Aop_g27000 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
Azfi_s0012.g012907 TUA3 not classified & original description: CDS=210-746 0.02 OrthoFinder output from all 39 species
Cba_g11710 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
Cba_g15078 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Ceric.09G076600.1 TOR2, TUA4,... alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
Dcu_g05420 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Len_g12228 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Len_g26529 TUA6 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
Len_g47419 TOR2, TUA4 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Lfl_g22862 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
MA_8283565g0010 TOR2, TUA4 Tubulin alpha-6 chain OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 39 species
Msp_g29063 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ore_g06409 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 39 species
Pir_g13448 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Pnu_g23943 TUA6 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pp3c12_14250V3.1 TOR2, TUA4, Pp3c12_14250 Tubulin/FtsZ family protein 0.01 OrthoFinder output from all 39 species
Sam_g26535 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g05098 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 39 species
Spa_g07521 TUA3 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Spa_g37340 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Spa_g55432 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Tin_g05549 TOR2, TUA4 alpha-Tubulin component *(TUA) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004476 mannose-6-phosphate isomerase activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!