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  5. Nbi_g10088

Nbi_g10088


Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0000959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10088

Target Alias Description ECC score Gene Family Method Actions
Cre03.g162650 No alias Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
GSVIVT01026845001 No alias Coenzyme metabolism.tetrahydrofolate... 0.02 OrthoFinder output from all 47 species
Ore_g08858 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Zm00001e027507_P002 Zm00001e027507 bifunctional 5,10-methylene-THF dehydrogenase and... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR020630 THF_DH/CycHdrlase_cat_dom 9 124
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom 127 293
No external refs found!