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  5. Nbi_g10080

Nbi_g10080


Description : not classified & original description: none


Gene families : OG0003174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10080

Target Alias Description ECC score Gene Family Method Actions
AT1G67325 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g23567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427843g0020 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g09920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g23819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010397_P003 Zm00001e010397 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 239 268
IPR001876 Znf_RanBP2 190 220
IPR001876 Znf_RanBP2 16 45
No external refs found!