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  1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g10046

Nbi_g10046 (ATMYB120, MYB120)


Aliases : ATMYB120, MYB120

Description : MYB class-R2R3 subgroup-18 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Expression Profile


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Co-expression Networks

Type Description Actions
Neighborhood HRR: Nbi_g10046
Cluster HCCA: Cluster_85

Expression Context Conservation (ECC)

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00204920 MYB36, AtMYB36,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 OrthoFinder output from all 47 species
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 OrthoFinder output from all 47 species
Ala_g20862 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g40583 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63272 AtMYB20, MYB20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30932.t1 AtMYB50, MYB50,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56182.t1 AtMYB20, MYB20,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67215.t1 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69919 AtMYB40, MYB40 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.21G043600.1 MYB86, ATMYB86,... not classified & original description: pacid=50602804... 0.04 OrthoFinder output from all 47 species
Ceric.25G002300.1 AtMYB50, MYB50,... not classified & original description: pacid=50594289... 0.03 OrthoFinder output from all 47 species
Dac_g09953 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32298 MYB19, AtMYB19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35445 MYB103,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39749 AtMYB40, MYB40 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47339 ATMYB4, MYB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14581 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007740001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01008090001 ATMYB35, TDF1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01014770001 MYB103,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01024036001 MYB32, AtMYB32 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
Gb_02422 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Gb_18153 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g03720.1 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g35500.1 MYB6, AtMYB6,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_10434028g0010 ATMYB21, MYB21, ATMYB3 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_316475g0010 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_93127g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Nbi_g09225 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17491 DUO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43976 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ore_g43977 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g14448 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25791 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g093890.3.1 ATMYB14, MYB14,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc03g093940.2.1 ATMYB14, MYB14,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc03g119370.2.1 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc04g056310.3.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc07g006750.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc09g008250.4.1 MYB36, AtMYB36,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc11g069030.3.1 MYB36, AtMYB36,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Spa_g05204 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.04 OrthoFinder output from all 47 species
Tin_g26286 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009849_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e023100_P001 MYB19, AtMYB19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e034807_P001 AtMYB42, MYB42,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Functional Annotation

  • GO
  • Predicted GO
  • InterPro
Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 95 138
IPR001005 SANT/Myb 42 89
External Links
No external refs found!
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