AT1G17580 (ATMYA1, XI-1, MYA1)

Aliases : ATMYA1, XI-1, MYA1

Description : myosin 1

Gene families : OG_01_0000117 (Gene family) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G17580
Cluster HCCA cluster: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G04160 XI-8, XI-B, XIB, ATXIB myosin XI B 0.03 Gene family
Cpa|evm.model.tig00000113.17 No alias cell.organisation.cytoskeleton.Myosin.Class... 0.01 Gene family
Cpa|evm.model.tig00021108.13 No alias cell.organisation.cytoskeleton.Myosin.Class... 0.01 Gene family
GSVIVT01035479001 No alias cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
LOC_Os10g19860 Os10g0339400 cell.organisation.cytoskeleton.Myosin.Class... 0.06 Gene family
Solyc07g041150.3.1 Solyc07g041150.3 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
Solyc07g063590.3.1 Solyc07g063590.3 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
Solyc08g061500.2.1 Solyc08g061500.2 cell.organisation.cytoskeleton.Myosin.Class... 0.05 Gene family
Zm00001d021785 GRMZM2G057380 cell.organisation.cytoskeleton.Myosin.Class... 0.04 Gene family
Zm00001d032637 GRMZM2G113202 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family
Zm00001d052110 GRMZM2G449909 cell.organisation.cytoskeleton.Myosin.Class... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003774 motor activity ISS
BP GO:0006606 protein import into nucleus RCA
BP GO:0007062 sister chromatid cohesion RCA
BP GO:0009630 gravitropism RCA
BP GO:0009791 post-embryonic development IGI
BP GO:0009880 embryonic pattern specification RCA
BP GO:0010072 primary shoot apical meristem specification RCA
BP GO:0010090 trichome morphogenesis IGI
BP GO:0010154 fruit development IGI
BP GO:0010431 seed maturation RCA
BP GO:0016049 cell growth IGI
CC GO:0016459 myosin complex ISS
BP GO:0030048 actin filament-based movement RCA
BP GO:0030048 actin filament-based movement TAS
MF GO:0042802 identical protein binding IPI
BP GO:0045595 regulation of cell differentiation RCA
BP GO:0048467 gynoecium development IGI
BP GO:0051301 cell division IGI
BP GO:0051301 cell division RCA
BP GO:0051645 Golgi localization IMP
BP GO:0051645 Golgi localization RCA
BP GO:0051646 mitochondrion localization IGI
BP GO:0051646 mitochondrion localization RCA
BP GO:0060151 peroxisome localization IGI
BP GO:0060151 peroxisome localization RCA
BP GO:0090436 leaf pavement cell development IGI
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 61 717
IPR000048 IQ_motif_EF-hand-BS 734 753
IPR000048 IQ_motif_EF-hand-BS 756 773
IPR000048 IQ_motif_EF-hand-BS 853 872
IPR000048 IQ_motif_EF-hand-BS 782 800
IPR000048 IQ_motif_EF-hand-BS 829 848
IPR004009 Myosin_N 9 45
IPR002710 Dilute_dom 1338 1442
No external refs found!