AT1G16800


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0000616 (Gene family) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G16800
Cluster HCCA cluster: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000053.4 No alias 28.1 DNA.synthesis/chromatin structure P-loop containing... 0.03 Gene family
Cre07.g342450 No alias 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.01 Gene family
GSVIVT01009001001 No alias 28.1 DNA.synthesis/chromatin structure P-loop containing... 0.02 Gene family
GSVIVT01014679001 No alias 28.1 DNA.synthesis/chromatin structure Similar to yeast... 0.08 Gene family
GSVIVT01029557001 No alias 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.07 Gene family
LOC_Os09g32180 No alias 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.02 Gene family
MA_208026g0010 No alias 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.01 Gene family
MA_88596g0010 No alias 28.1 DNA.synthesis/chromatin structure P-loop containing... 0.03 Gene family
Smo444379 PACid_15416014 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.06 Gene family
Solyc03g124010.3.1 Solyc03g124010.3 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.13 Gene family
Solyc04g072830.3.1 Solyc04g072830.3 28.1 DNA.synthesis/chromatin structure P-loop containing... 0.04 Gene family
Zm00001d014344 GRMZM2G348582,... 28.1 DNA.synthesis/chromatin structure P-loop containing... 0.02 Gene family
Zm00001d020978 GRMZM2G340456,... 27.1.19 RNA.processing.ribonucleases P-loop containing... 0.09 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
MF GO:0008266 poly(U) RNA binding IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!