AT1G16470 (PAB1)


Aliases : PAB1

Description : proteasome subunit PAB1


Gene families : OG_01_0003926 (Gene family) Phylogenetic Tree(s): OG0003926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G16470
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.40 No alias 29.5 protein.degradation Encodes 20S proteasome subunit... 0.05 Gene family
Cre08.g373250 No alias 29.5 protein.degradation Encodes 20S proteasome subunit... 0.13 Gene family
GSVIVT01012066001 No alias No description available 0.07 Gene family
LOC_Os02g42320 Os02g0634900 29.5 protein.degradation Encodes 20S proteasome subunit... 0.04 Gene family
LOC_Os03g26970 Os03g0387100 29.5 protein.degradation Encodes 20S proteasome subunit... 0.05 Gene family
Solyc07g055080.3.1 Solyc07g055080.3 No description available 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005839 proteasome core complex TAS Arabidopsis.org
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Arabidopsis.org
MF GO:0008233 peptidase activity ISS Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0010043 response to zinc ion IEP Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 31 213
No external refs found!