AT1G16280 (AtRH36, SWA3, RH36)

Aliases : AtRH36, SWA3, RH36

Description : RNA helicase 36

Gene families : OG_01_0001498 (Gene family) Phylogenetic Tree(s): OG0001498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G16280
Cluster HCCA cluster: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.20 No alias protein.synthesis.ribosome... 0.04 Gene family
Cpa|evm.model.tig00021122.18 No alias protein.synthesis.ribosome... 0.02 Gene family
Cre12.g505200 No alias protein.synthesis.ribosome... 0.1 Gene family
GSVIVT01036761001 No alias protein.synthesis.ribosome... 0.03 Gene family
LOC_Os03g46610 Os03g0669000 protein.synthesis.ribosome... 0.03 Gene family
LOC_Os07g43980 Os07g0633500 protein.synthesis.ribosome... 0.05 Gene family
Solyc10g007550.3.1 Solyc10g007550.3 protein.synthesis.ribosome... 0.13 Gene family
Zm00001d014787 GRMZM2G075027 protein.synthesis.ribosome... 0.08 Gene family
Zm00001d022246 GRMZM2G099253 protein.synthesis.ribosome... 0.12 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI
CC GO:0005634 nucleus IDA
CC GO:0005634 nucleus ISM
BP GO:0006364 rRNA processing IMP
BP GO:0006606 protein import into nucleus RCA
MF GO:0008026 ATP-dependent helicase activity ISS
BP GO:0009553 embryo sac development IMP
BP GO:0009561 megagametogenesis IMP
BP GO:0009791 post-embryonic development IMP
CC GO:0090406 pollen tube IDA
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 82 250
IPR001650 Helicase_C 290 397
No external refs found!