AT1G15930


Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein


Gene families : OG_01_0002570 (Gene family) Phylogenetic Tree(s): OG0002570_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G15930
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.34 No alias 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.16 Gene family
Cre04.g214503 No alias 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.1 Gene family
GSVIVT01023591001 No alias 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.13 Gene family
GSVIVT01034219001 No alias 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.14 Gene family
LOC_Os07g05580 Os07g0150200 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os07g12650 Os07g0229900 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.06 Gene family
MA_16920g0010 No alias 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.04 Gene family
Smo441919 PACid_15411680 No description available 0.12 Gene family
Solyc01g103800.3.1 Solyc01g103800.3 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.17 Gene family
Solyc03g083290.3.1 Solyc03g083290.3 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.03 Gene family
Solyc12g042650.2.1 Solyc12g042650.2 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.17 Gene family
Zm00001d005200 GRMZM2G139900 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.11 Gene family
Zm00001d010220 No alias 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.03 Gene family
Zm00001d019219 GRMZM2G063340 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.12 Gene family
Zm00001d039106 GRMZM2G132929 29.2.1.2.1.12 protein.synthesis.ribosomal... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
CC GO:0022627 cytosolic small ribosomal subunit IDA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 30 123
No external refs found!