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AT1G15390 (ATDEF1, PDF1A)


Aliases : ATDEF1, PDF1A

Description : peptide deformylase 1A


Gene families : OG_01_0005048 (Gene family) Phylogenetic Tree(s): OG0005048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G15390
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.85 No alias No description available 0.02 Gene family
GSVIVT01017280001 No alias 26.1 misc.misc2 encodes a peptide deformylase-like... 0.07 Gene family
LOC_Os01g37510 Os01g0555800 26.1 misc.misc2 encodes a peptide deformylase-like... 0.04 Gene family
Solyc07g015860.3.1 Solyc07g015860.3 26.1 misc.misc2 encodes a peptide deformylase-like... 0.04 Gene family
Zm00001d022337 GRMZM2G018771 26.1 misc.misc2 encodes a peptide deformylase-like... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009505 plant-type cell wall IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
MF GO:0042586 peptide deformylase activity IDA Arabidopsis.org
MF GO:0042586 peptide deformylase activity ISS Arabidopsis.org
BP GO:0043686 co-translational protein modification IDA Arabidopsis.org
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 82 247
No external refs found!