AT1G15215


Description : BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).


Gene families : OG_01_0001762 (Gene family) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G15215
Cluster HCCA cluster: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Solyc10g007130.3.1 Solyc10g007130.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d005584 GRMZM2G111204 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006306 DNA methylation IMP Arabidopsis.org
BP GO:0006346 methylation-dependent chromatin silencing IMP Arabidopsis.org
BP GO:0031047 gene silencing by RNA IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032001 SAWADEE_dom 105 221
No external refs found!