AT1G05140


Description : Peptidase M50 family protein


Gene families : OG_01_0005602 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005602_tree ,
OG_02_0006436 (LandPlants) Phylogenetic Tree(s): OG_02_0006436_tree ,
OG_03_0008291 (SeedPlants) Phylogenetic Tree(s): OG_03_0008291_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05140
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.111 No alias Protein modification.peptide maturation.plastid.AraSP... 0.02 Archaeplastida
Cre03.g144164 No alias Protein modification.peptide maturation.plastid.AraSP... 0.03 Archaeplastida
GSVIVT01030436001 No alias Protein modification.peptide maturation.plastid.AraSP... 0.09 Archaeplastida
Pp3c9_3170V3.1 No alias ARABIDOPSIS SERIN PROTEASE 0.05 Archaeplastida
Solyc07g052290.1.1 No alias plastidial inner envelope protease (AraSP) 0.06 Archaeplastida
GSVIVT01030436001 No alias Protein modification.peptide maturation.plastid.AraSP... 0.08 LandPlants
Pp3c9_3170V3.1 No alias ARABIDOPSIS SERIN PROTEASE 0.05 LandPlants
Solyc07g052290.1.1 No alias plastidial inner envelope protease (AraSP) 0.06 LandPlants
GSVIVT01030436001 No alias Protein modification.peptide maturation.plastid.AraSP... 0.08 SeedPlants
Solyc07g052290.1.1 No alias plastidial inner envelope protease (AraSP) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006508 proteolysis ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009536 plastid ISS Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008915 Peptidase_M50 87 422
IPR001478 PDZ 200 274
No external refs found!