Nbi_g09710


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09710

Target Alias Description ECC score Gene Family Method Actions
AT3G02330 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g15138 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g16843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07040 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05734 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19946 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g65854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34727.t1 Aspi01Gene34727 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16716 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.08 OrthoFinder output from all 47 species
Ceric.30G012500.1 Ceric.30G012500 not classified & original description: pacid=50608997... 0.02 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.06 OrthoFinder output from all 47 species
Dac_g22002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35356 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35456 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26019 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13001 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14702 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g15174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013713 EMB2758 not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.01 OrthoFinder output from all 47 species
Sam_g23897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 804 855
IPR002885 Pentatricopeptide_repeat 361 384
IPR002885 Pentatricopeptide_repeat 588 618
IPR002885 Pentatricopeptide_repeat 487 513
IPR002885 Pentatricopeptide_repeat 459 486
IPR002885 Pentatricopeptide_repeat 661 686
IPR002885 Pentatricopeptide_repeat 387 433
IPR002885 Pentatricopeptide_repeat 285 333
IPR002885 Pentatricopeptide_repeat 687 733
No external refs found!