AT1G14320 (SAC52, RPL10, RPL10A)


Aliases : SAC52, RPL10, RPL10A

Description : Ribosomal protein L16p/L10e family protein


Gene families : OG_01_0002869 (Gene family) Phylogenetic Tree(s): OG0002869_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G14320
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001424.5 No alias 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.25 Gene family
GSVIVT01024537001 No alias 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.16 Gene family
LOC_Os11g11390 Os11g0220800 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.18 Gene family
MA_17326g0010 No alias 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.15 Gene family
Smo437527 PACid_15418987 No description available 0.1 Gene family
Solyc06g007520.3.1 Solyc06g007520.3 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.39 Gene family
Solyc06g082650.3.1 Solyc06g082650.3 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.24 Gene family
Solyc06g082670.3.1 Solyc06g082670.3 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.36 Gene family
Zm00001d013777 GRMZM2G087233,... 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.05 Gene family
Zm00001d033128 GRMZM2G027451 29.2.1.2.2.10 protein.synthesis.ribosomal... 0.18 Gene family

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Arabidopsis.org
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005634 nucleus IDA Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005773 vacuole IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005840 ribosome IPI Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
BP GO:0006412 translation TAS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0015934 large ribosomal subunit ISS Arabidopsis.org
CC GO:0022625 cytosolic large ribosomal subunit IDA Arabidopsis.org
CC GO:0022626 cytosolic ribosome IDA Arabidopsis.org
BP GO:0032502 developmental process IMP Arabidopsis.org
BP GO:0071493 cellular response to UV-B IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 13 166
No external refs found!