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  5. Nbi_g09664

Nbi_g09664


Description : MYB-RELATED transcription factor *(MYB-R-R) & original description: none


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09664

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00074p00097250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Als_g61095 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g13916 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g29246 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g41900.1 LOC_Os01g41900 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os08g04840.1 LOC_Os08g04840 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os10g41200.1 LOC_Os10g41200 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Nbi_g00718 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.06 OrthoFinder output from all 47 species
Solyc08g065380.3.1 Solyc08g065380 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Spa_g16329 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 64 108
No external refs found!