AT1G13960 (WRKY4)


Aliases : WRKY4

Description : WRKY DNA-binding protein 4


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G13960
Cluster HCCA cluster: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT1G29280 ATWRKY65, WRKY65 WRKY DNA-binding protein 65 0.03 Gene family
AT1G64000 WRKY56, ATWRKY56 WRKY DNA-binding protein 56 0.03 Gene family
AT2G25000 ATWRKY60, WRKY60 WRKY DNA-binding protein 60 0.03 Gene family
AT2G47260 WRKY23, ATWRKY23 WRKY DNA-binding protein 23 0.03 Gene family
AT4G01250 WRKY22, AtWRKY22 WRKY family transcription factor 0.04 Gene family
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.04 Gene family
AT5G26170 ATWRKY50, WRKY50 WRKY DNA-binding protein 50 0.02 Gene family
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.03 Gene family
GSVIVT01008046001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01008553001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01010525001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01019419001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01021397001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01022245001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01028244001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01030453001 No alias No description available 0.05 Gene family
GSVIVT01033063001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01033195001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
GSVIVT01034148001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g14440 Os01g0246700 No description available 0.02 Gene family
LOC_Os01g40260 Os01g0584900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os01g53040 Os01g0730700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os02g53100 Os02g0770500 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os04g21950 Os04g0287400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os04g50920 Os04g0597300 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os05g25770 Os05g0322900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os05g27730 Os05g0343400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os05g40060 Os05g0478400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os05g49210 Os05g0567200 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os08g29660 Os08g0386200 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os11g02470 Os11g0116600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os11g02480 Os11g0116900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os12g32250 Os12g0507300,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_11072g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_212937g0010 No alias No description available 0.04 Gene family
MA_53351g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
MA_558583g0010 No alias No description available 0.03 Gene family
MA_892467g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Smo81371 PACid_15407463 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc01g095630.3.1 Solyc01g095630.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc02g032950.3.1 Solyc02g032950.3 No description available 0.03 Gene family
Solyc02g080890.3.1 Solyc02g080890.3 No description available 0.02 Gene family
Solyc02g088345.1.1 Solyc02g088345.1 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc04g078550.3.1 Solyc04g078550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc06g066370.3.1 Solyc06g066370.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc06g068460.3.1 Solyc06g068460.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc08g008277.1.1 Solyc08g008277.1 No description available 0.04 Gene family
Solyc08g008280.3.1 Solyc08g008280.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc09g014990.3.1 Solyc09g014990.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d010399 GRMZM2G449681 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d010617 GRMZM2G432583 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d012789 GRMZM2G111354 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d030139 GRMZM2G383594 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d037854 GRMZM2G127064 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d038023 GRMZM2G012724 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d038451 GRMZM2G169966 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d038761 GRMZM2G401521 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d038843 GRMZM5G863420 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d039245 GRMZM5G871347 No description available 0.03 Gene family
Zm00001d040554 GRMZM2G327349 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d043063 GRMZM2G065290 No description available 0.02 Gene family
Zm00001d043663 GRMZM2G101405 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d049173 GRMZM2G054125 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d050247 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d053369 GRMZM2G038158 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 409 466
IPR003657 WRKY_dom 229 285
No external refs found!