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Nbi_g09642 (RPL10B)


Aliases : RPL10B

Description : component *(uL16) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09642
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00080890 RPL10B,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00151750 RPL10B,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G14320 SAC52, RPL10, RPL10A Ribosomal protein L16p/L10e family protein 0.03 OrthoFinder output from all 47 species
Als_g28404 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g13129 RPL10B component *(uL16) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001424.5 RPL10C, SAG24 Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01001137001 RPL10B 60S ribosomal protein L10 OS=Vitis riparia 0.07 OrthoFinder output from all 47 species
LOC_Os11g11390.1 RPL10B, LOC_Os11g11390 component RPL10 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_17326g0010 SAC52, RPL10, RPL10A component RPL10 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp4g23990.1 RPL10B component RPL10 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Pp3c11_4130V3.1 RPL10B, Pp3c11_4130 Ribosomal protein L16p/L10e family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_29600V3.1 RPL10B, Pp3c2_29600 Ribosomal protein L16p/L10e family protein 0.03 OrthoFinder output from all 47 species
Pp3c7_22400V3.1 RPL10B, Pp3c7_22400 Ribosomal protein L16p/L10e family protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012273 RPL10B not classified & original description: CDS=126-530 0.03 OrthoFinder output from all 47 species
Solyc06g007520.4.1 RPL10B, Solyc06g007520 component RPL10 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc06g082650.4.1 SAC52, RPL10,... component RPL10 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc06g082670.3.1 RPL10B, Solyc06g082670 component RPL10 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 12 166
No external refs found!