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  5. Nbi_g09576

Nbi_g09576


Description : catalytic protein *(MurD) of UDP-N-acetylmuramic acid pentapeptide formation & original description: none


Gene families : OG0008724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09576

Target Alias Description ECC score Gene Family Method Actions
Pnu_g08522 MURE, PDE316, ATMURE catalytic protein *(MurD) of UDP-N-acetylmuramic acid... 0.03 OrthoFinder output from all 47 species
Sam_g37805 No alias catalytic protein *(MurD) of UDP-N-acetylmuramic acid... 0.02 OrthoFinder output from all 47 species
Solyc05g012800.1.1 Solyc05g012800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 164 346
IPR004101 Mur_ligase_C 370 418
No external refs found!