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Description : EC_4.1 carbon-carbon lyase & original description: none
Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g09562 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G25570 | No alias | Adenosylmethionine decarboxylase family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03505 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042654 | SAMDC | EC_4.1 carbon-carbon lyase & original description: CDS=700-2217 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15212 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G058600.1 | SAMDC, Ceric.07G058600 | EC_4.1 carbon-carbon lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g04980.1 | LOC_Os04g04980 | ornithine decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g37120.1 | LOC_Os09g37120 | ornithine decarboxylase | 0.04 | OrthoFinder output from all 47 species | |
| Len_g56419 | No alias | ornithine decarboxylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25624 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25083 | No alias | ornithine decarboxylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02769 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32435 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g07560 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22755 | SAMDC | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00861 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035959_P001 | Zm00001e035959 | ornithine decarboxylase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| No external refs found! |