AT1G12890


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G12890
Cluster HCCA cluster: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.06 Gene family
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G14230 RAP2.2 related to AP2 2 0.03 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.05 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
GSVIVT01035852001 No alias No description available 0.03 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.02 Gene family
LOC_Os04g56150 Os04g0655700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g28350 Os05g0351200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.03 Gene family
LOC_Os08g41030 Os08g0521600 No description available 0.02 Gene family
LOC_Os10g41130 Os10g0560700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
MA_115502g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_203191g0010 No alias No description available 0.03 Gene family
MA_54341g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.04 Gene family
Solyc04g012050.3.1 Solyc04g012050.3 No description available 0.03 Gene family
Solyc05g013540.1.1 Solyc05g013540.1 No description available 0.03 Gene family
Solyc08g007230.2.1 Solyc08g007230.2 No description available 0.02 Gene family
Solyc08g082210.3.1 Solyc08g082210.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.02 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.05 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027929 No alias No description available 0.04 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.02 Gene family
Zm00001d036889 GRMZM2G106591 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 20 68
No external refs found!