AT1G12770 (ISE1, EMB1586)


Aliases : ISE1, EMB1586

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0005036 (Gene family) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G12770
Cluster HCCA cluster: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre07.g349300 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.04 Gene family
Cre07.g351600 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.02 Gene family
LOC_Os02g42406 Os02g0636300 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.12 Gene family
LOC_Os03g12000 Os03g0219700 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.13 Gene family
MA_495935g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.08 Gene family
Solyc08g080550.1.1 Solyc08g080550.1 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.15 Gene family
Zm00001d017345 No alias 27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity ISS Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
BP GO:0009663 plasmodesma organization IMP Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy NAS Arabidopsis.org
BP GO:0010497 plasmodesmata-mediated intercellular transport IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 398 502
IPR011545 DEAD/DEAH_box_helicase_dom 134 326
No external refs found!