AT1G04940 (TIC20)


Aliases : TIC20

Description : translocon at the inner envelope membrane of chloroplasts 20


Gene families : OG_01_0004638 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004638_tree ,
OG_02_0004590 (LandPlants) Phylogenetic Tree(s): OG_02_0004590_tree ,
OG_03_0006090 (SeedPlants) Phylogenetic Tree(s): OG_03_0006090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04940
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cre08.g379650 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 Archaeplastida
GSVIVT01009769001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.11 Archaeplastida
LOC_Os07g38110.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.08 Archaeplastida
Mp3g05820.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.04 Archaeplastida
Solyc05g054720.3.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.03 Archaeplastida
Zm00001e010579_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e035290_P002 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.05 Archaeplastida
GSVIVT01009769001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.11 LandPlants
LOC_Os07g38110.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.08 LandPlants
Mp3g05820.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.04 LandPlants
Solyc05g054720.3.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.03 LandPlants
Zm00001e010579_P001 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e035290_P002 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.05 LandPlants
GSVIVT01009769001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.11 SeedPlants
LOC_Os07g38110.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.07 SeedPlants
Solyc04g076740.3.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.02 SeedPlants
Solyc05g054720.3.1 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.03 SeedPlants
Zm00001e010579_P001 No alias no hits & (original description: none) 0.06 SeedPlants
Zm00001e035290_P002 No alias component Tic20-I/IV of inner envelope TIC-20 complex 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
BP GO:0006626 protein targeting to mitochondrion RCA Interproscan
MF GO:0008565 obsolete protein transporter activity IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009706 chloroplast inner membrane IDA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0045037 protein import into chloroplast stroma IDA Interproscan
BP GO:0045037 protein import into chloroplast stroma IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005691 Tic20 94 267
No external refs found!