AT1G12040 (LRX1)


Aliases : LRX1

Description : leucine-rich repeat/extensin 1


Gene families : OG_01_0000280 (Gene family) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G12040
Cluster HCCA cluster: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.05 Gene family
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.05 Gene family
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.04 Gene family
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.02 Gene family
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.05 Gene family
GSVIVT01015416001 No alias No description available 0.03 Gene family
GSVIVT01020574001 No alias No description available 0.04 Gene family
GSVIVT01031843001 No alias No description available 0.02 Gene family
LOC_Os03g43650 Os03g0637600 No description available 0.02 Gene family
LOC_Os03g58110 Os03g0795300 No description available 0.03 Gene family
LOC_Os07g07990 Os07g0176500 No description available 0.02 Gene family
LOC_Os12g35710 Os12g0542200 No description available 0.04 Gene family
Smo412903 PACid_15415332 No description available 0.02 Gene family
Solyc05g026240.2.1 Solyc05g026240.2 No description available 0.02 Gene family
Solyc07g053840.1.1 Solyc07g053840.1 No description available 0.02 Gene family
Zm00001d006435 GRMZM2G169669 No description available 0.02 Gene family
Zm00001d007830 GRMZM2G176394 No description available 0.05 Gene family
Zm00001d015213 GRMZM5G805485 10.5.3 cell wall.cell wall proteins.LRR encodes a a... 0.02 Gene family
Zm00001d033279 GRMZM2G341410 No description available 0.03 Gene family
Zm00001d036455 GRMZM2G082823 10.5.3 cell wall.cell wall proteins.LRR encodes a a... 0.04 Gene family
Zm00001d037711 GRMZM2G149201 No description available 0.03 Gene family
Zm00001d044373 GRMZM2G333811 No description available 0.04 Gene family

Type GO Term Name Evidence Source
BP GO:0000904 cell morphogenesis involved in differentiation IMP Arabidopsis.org
MF GO:0005199 structural constituent of cell wall ISS Arabidopsis.org
CC GO:0009505 plant-type cell wall IDA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
BP GO:0009826 unidimensional cell growth IMP Arabidopsis.org
MF GO:0009927 histidine phosphotransfer kinase activity NAS Arabidopsis.org
BP GO:0010054 trichoblast differentiation IMP Arabidopsis.org
BP GO:0010054 trichoblast differentiation RCA Arabidopsis.org
BP GO:0048527 lateral root development RCA Arabidopsis.org
BP GO:0048589 developmental growth RCA Arabidopsis.org
BP GO:0048765 root hair cell differentiation RCA Arabidopsis.org
BP GO:0048767 root hair elongation RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 57 89
No external refs found!