1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g09402

Nbi_g09402 (HTA7)


Aliases : HTA7

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09402

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00128810 RAT5, HTA1,... Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.06 OrthoFinder output from all 47 species
Ala_g14593 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23857 HTA7 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g02581 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g01994 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09992 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09993 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G127000.1 HTA7, Ceric.01G127000 histone *(H2A) & original description: pacid=50592416... 0.05 OrthoFinder output from all 47 species
Ceric.01G127100.1 HTA6, Ceric.01G127100 histone *(H2A) & original description: pacid=50591885... 0.06 OrthoFinder output from all 47 species
Ceric.06G046500.1 HTA7, Ceric.06G046500 histone *(H2A) & original description: pacid=50619602... 0.07 OrthoFinder output from all 47 species
Ceric.11G083100.1 HTA7, Ceric.11G083100 histone *(H2A) & original description: pacid=50596723... 0.06 OrthoFinder output from all 47 species
Ceric.1Z006200.1 HTA7, Ceric.1Z006200 histone *(H2A) & original description: pacid=50569283... 0.05 OrthoFinder output from all 47 species
Cre06.g264750 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g264950 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g265350 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g266700 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g268050 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g268300 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g271350 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g273900 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274200 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g274800 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g275850 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre06.g276500 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g276950 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g504500 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g504750 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g505550 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre12.g506250 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre13.g570100 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre13.g590800 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre13.g591150 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre17.g708550 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g709200 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g710400 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g711700 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g713400 HTA10 Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
Cre17.g714500 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Dac_g03954 GAMMA-H2AX,... histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13937 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34896 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05168 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11978 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011034001 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Gb_07070 GAMMA-H2AX,... histone (H2A) 0.04 OrthoFinder output from all 47 species
Gb_37579 HTA7 histone (H2A) 0.06 OrthoFinder output from all 47 species
LOC_Os05g02300.1 HTA12, LOC_Os05g02300 histone (H2A) 0.06 OrthoFinder output from all 47 species
LOC_Os07g36130.1 HTA2, LOC_Os07g36130 histone (H2A) 0.04 OrthoFinder output from all 47 species
LOC_Os07g36140.1 RAT5, HTA1,... histone (H2A) 0.03 OrthoFinder output from all 47 species
LOC_Os08g33100.1 HTA2, LOC_Os08g33100 histone (H2A) 0.04 OrthoFinder output from all 47 species
LOC_Os12g25120.1 HTA2, LOC_Os12g25120 histone (H2A) 0.04 OrthoFinder output from all 47 species
LOC_Os12g34510.1 GAMMA-H2AX,... histone (H2A) 0.04 OrthoFinder output from all 47 species
Len_g04999 GAMMA-H2AX,... histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g05644 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37716 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
MA_169054g0020 HTA10 histone (H2A) 0.06 OrthoFinder output from all 47 species
MA_213048g0010 HTA7 histone (H2A) 0.05 OrthoFinder output from all 47 species
MA_22203g0020 RAT5, HTA1, ATHTA1 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_427046g0010 RAT5, HTA1, ATHTA1 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_7320190g0010 HTA6 histone (H2A) 0.03 OrthoFinder output from all 47 species
MA_74667g0010 HTA7 histone (H2A) 0.06 OrthoFinder output from all 47 species
MA_962778g0010 HTA7 histone (H2A) 0.06 OrthoFinder output from all 47 species
Mp2g00760.1 GAMMA-H2AX,... histone (H2A) 0.06 OrthoFinder output from all 47 species
Mp3g00840.1 HTA10 histone (H2A) 0.04 OrthoFinder output from all 47 species
Msp_g11191 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29485 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_29410V3.1 HTA10, Pp3c6_29410 histone H2A 10 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000823 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-471 0.06 OrthoFinder output from all 47 species
Sam_g10764 No alias histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10765 No alias histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29426 No alias histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g48398 No alias histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Smo76653 HTA2 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Solyc01g099410.3.1 HTA7, Solyc01g099410 histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc03g005220.4.1 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc06g084430.4.1 GAMMA-H2AX,... histone (H2A) 0.05 OrthoFinder output from all 47 species
Solyc09g074300.1.1 GAMMA-H2AX,... histone (H2A) 0.05 OrthoFinder output from all 47 species
Solyc12g005270.2.1 HTA10, Solyc12g005270 histone (H2A) 0.05 OrthoFinder output from all 47 species
Spa_g03104 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03522 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03889 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32347 HTA6 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32923 HTA6 histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g45415 HTA6 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11136 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12865 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14389 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010516_P001 RAT5, HTA1,... histone (H2A) 0.09 OrthoFinder output from all 47 species
Zm00001e011643_P001 HTA6, Zm00001e011643 histone (H2A) 0.04 OrthoFinder output from all 47 species
Zm00001e020483_P001 HTA6, Zm00001e020483 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e034815_P001 HTA12, Zm00001e034815 histone (H2A) 0.07 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 17 93
IPR032454 Histone_H2A_C 96 129
No external refs found!