1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g09308

Nbi_g09308 (MYB3R-1, ATMYB3R1,...)


Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09308

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00061950 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.03 OrthoFinder output from all 47 species
Als_g14702 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20384 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47836 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G051800.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G017100.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cre12.g522400 ATMYB3R5, MYB3R-5 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Dac_g04675 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12641 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015370001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035663001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os12g13570.1 MYB3R-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g56915 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18053 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g09350.1 AtMYB98, MYB98 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Msp_g20543 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44400 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02270 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo6091 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc08g068320.3.1 MYB3R-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g39803 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 51 97
IPR001005 SANT/Myb 155 197
IPR001005 SANT/Myb 103 149
No external refs found!