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  5. Nbi_g09294

Nbi_g09294 (CARB)


Aliases : CARB

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09294

Target Alias Description ECC score Gene Family Method Actions
AT1G29900 CARB carbamoyl phosphate synthetase B 0.04 OrthoFinder output from all 47 species
Dcu_g07166 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Pp3c2_19430V3.1 CARB, Pp3c2_19430 carbamoyl phosphate synthetase B 0.01 OrthoFinder output from all 47 species
Spa_g08428 CARB EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e027763_P001 CARB, Zm00001e027763 large subunit of carbamoyl phosphate synthetase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 796 997
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 238 444
IPR011607 MGS-like_dom 1081 1167
IPR005480 CarbamoylP_synth_lsu_oligo 537 614
No external refs found!