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Nbi_g09279 (HTA7)


Aliases : HTA7

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09279
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00215390 HTA6,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Adi_g019584 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01852 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37648 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02581 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g54113 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G072800.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50620340... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder output from all 47 species
Nbi_g09403 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18514 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27681 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40966 HTA2 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42735 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42912 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64775 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02722 HTA13 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 93
IPR032454 Histone_H2A_C 96 129
No external refs found!