AT1G10450 (SNL6)


Aliases : SNL6

Description : SIN3-like 6


Gene families : OG_01_0000397 (Gene family) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G10450
Cluster HCCA cluster: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001155.28 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
Cre03.g180800 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.02 Gene family
GSVIVT01020136001 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.04 Gene family
GSVIVT01032579001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
LOC_Os01g01960 Os01g0109700 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
MA_18241g0010 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.03 Gene family
Smo440352 PACid_15404105 35.1.25 not assigned.no ontology.paired amphipathic... 0.03 Gene family
Solyc02g067570.3.1 Solyc02g067570.3 27.3.67 RNA.regulation of transcription.putative... 0.07 Gene family
Solyc02g087360.3.1 Solyc02g087360.3 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
Solyc05g006540.3.1 Solyc05g006540.3 35.1.25 not assigned.no ontology.paired amphipathic... 0.04 Gene family
Zm00001d008429 GRMZM2G334457 35.1.25 not assigned.no ontology.paired amphipathic... 0.03 Gene family
Zm00001d040123 GRMZM2G075320 35.1.25 not assigned.no ontology.paired amphipathic... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003822 PAH 135 178
IPR003822 PAH 50 94
IPR013194 HDAC_interact_dom 301 392
IPR031693 Sin3_C 842 1085
No external refs found!