AT1G09890


Description : Rhamnogalacturonate lyase family protein


Gene families : OG_01_0000931 (Gene family) Phylogenetic Tree(s): OG0000931_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G09890
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT4G24430 No alias Rhamnogalacturonate lyase family protein 0.03 Gene family
Zm00001d049251 GRMZM2G015854 10.6.3 cell wall.degradation.pectate lyases and... 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Arabidopsis.org
MF GO:0016829 lyase activity ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029413 RG-lyase_II 342 411
IPR010325 Rhamnogal_lyase 1 184
IPR029411 RG-lyase_III 426 612
No external refs found!