AT1G09800


Description : Pseudouridine synthase family protein


Gene families : OG_01_0005764 (Gene family) Phylogenetic Tree(s): OG0005764_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G09800
Cluster HCCA cluster: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g09290 Os12g0194800 29.1.30 protein.aa activation.pseudouridylate synthase... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
MF GO:0009982 pseudouridine synthase activity TAS Arabidopsis.org
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 60 170
IPR020097 PsdUridine_synth_TruA_a/b_dom 211 370
No external refs found!