AT1G09620


Description : ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases


Gene families : OG_01_0002560 (Gene family) Phylogenetic Tree(s): OG0002560_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G09620
Cluster HCCA cluster: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.67 No alias 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.02 Gene family
Cpa|evm.model.tig00022075.68 No alias 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.03 Gene family
Cre06.g293582 No alias 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.02 Gene family
GSVIVT01023222001 No alias 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.09 Gene family
LOC_Os09g21110 Os09g0378300 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.04 Gene family
LOC_Os09g32650 Os09g0503400 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.05 Gene family
MA_66020g0010 No alias 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.04 Gene family
Smo157130 PACid_15409754 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.02 Gene family
Smo410808 PACid_15408586 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.02 Gene family
Smo77212 PACid_15417053 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.02 Gene family
Solyc02g065300.1.1 Solyc02g065300.1 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.09 Gene family
Zm00001d001935 GRMZM2G071333 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.03 Gene family
Zm00001d005558 GRMZM5G887303 29.1.4 protein.aa activation.leucine-tRNA ligase ATP... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity ISS Arabidopsis.org
MF GO:0005524 ATP binding ISS Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
BP GO:0006418 tRNA aminoacylation for protein translation ISS Arabidopsis.org
BP GO:0008295 spermidine biosynthetic process RCA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 793 914
IPR002300 aa-tRNA-synth_Ia 22 104
IPR002300 aa-tRNA-synth_Ia 189 754
No external refs found!