AT1G08050


Description : Zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_01_0000347 (Gene family) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G08050
Cluster HCCA cluster: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Gene family
AT5G60710 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Gene family
GSVIVT01016259001 No alias No description available 0.04 Gene family
LOC_Os02g56280 Os02g0806700 No description available 0.04 Gene family
LOC_Os03g04890 Os03g0142500 No description available 0.05 Gene family
LOC_Os04g42980 Os04g0508800 No description available 0.02 Gene family
LOC_Os08g03270 Os08g0126100 No description available 0.03 Gene family
LOC_Os10g32740 Os10g0464500 No description available 0.03 Gene family
LOC_Os10g32760 Os10g0464800 No description available 0.03 Gene family
LOC_Os12g10250 Os12g0203500 No description available 0.03 Gene family
MA_129331g0010 No alias No description available 0.02 Gene family
MA_15445g0010 No alias No description available 0.02 Gene family
MA_218345g0010 No alias No description available 0.06 Gene family
Smo141910 PACid_15413485 No description available 0.02 Gene family
Solyc02g069470.3.1 Solyc02g069470.3 No description available 0.02 Gene family
Solyc05g056140.3.1 Solyc05g056140.3 No description available 0.03 Gene family
Zm00001d007190 GRMZM2G318296 No description available 0.05 Gene family
Zm00001d025825 GRMZM2G075019 No description available 0.02 Gene family
Zm00001d027621 GRMZM2G041899 No description available 0.05 Gene family
Zm00001d032753 GRMZM2G398198 No description available 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade RCA Arabidopsis.org
MF GO:0004842 ubiquitin-protein transferase activity ISS Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
BP GO:0006499 N-terminal protein myristoylation RCA Arabidopsis.org
BP GO:0006612 protein targeting to membrane RCA Arabidopsis.org
BP GO:0007154 cell communication RCA Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
BP GO:0009627 systemic acquired resistance RCA Arabidopsis.org
BP GO:0009690 cytokinin metabolic process RCA Arabidopsis.org
BP GO:0009697 salicylic acid biosynthetic process RCA Arabidopsis.org
BP GO:0009738 abscisic acid-activated signaling pathway RCA Arabidopsis.org
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Arabidopsis.org
BP GO:0010363 regulation of plant-type hypersensitive response RCA Arabidopsis.org
BP GO:0030968 endoplasmic reticulum unfolded protein response RCA Arabidopsis.org
BP GO:0031348 negative regulation of defense response RCA Arabidopsis.org
BP GO:0043069 negative regulation of programmed cell death RCA Arabidopsis.org
BP GO:0050832 defense response to fungus RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 69 98
IPR032838 Vwaint_dom 551 623
IPR002035 VWF_A 204 378
No external refs found!