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  5. Nbi_g08978

Nbi_g08978


Description : not classified & original description: none


Gene families : OG0006888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08978
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00245550 evm_27.TU.AmTr_v1... Regulator of nonsense transcripts 1 homolog... 0.04 OrthoFinder output from all 47 species
AT5G35970 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Aev_g05515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0225.g058913 No alias not classified & original description: CDS=1-1656 0.03 OrthoFinder output from all 47 species
Cba_g06579 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.19G036700.1 Ceric.19G036700 not classified & original description: pacid=50576348... 0.03 OrthoFinder output from all 47 species
Dac_g15964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01970 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g37707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_07655 No alias Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Lfl_g36332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435849g0020 No alias Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Mp3g22970.1 No alias Regulator of nonsense transcripts 1 homolog... 0.05 OrthoFinder output from all 47 species
Msp_g02098 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo90782 No alias Regulator of nonsense transcripts 1 homolog... 0.02 OrthoFinder output from all 47 species
Solyc03g097370.4.1 Solyc03g097370 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Tin_g09516 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 538 754
IPR041679 DNA2/NAM7-like_C 764 967
No external refs found!