AT1G06570 (HPD, PDS1)


Aliases : HPD, PDS1

Description : phytoene desaturation 1


Gene families : OG_01_0002553 (Gene family) Phylogenetic Tree(s): OG0002553_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G06570
Cluster HCCA cluster: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.8 No alias 16.1.3.1 secondary metabolism.isoprenoids.tocopherol... 0.01 Gene family
Cpa|evm.model.tig00000718.9 No alias No description available 0.01 Gene family
LOC_Os02g07160 Os02g0168100 16.1.3.1 secondary metabolism.isoprenoids.tocopherol... 0.05 Gene family
MA_356643g0010 No alias 16.1.3.1 secondary metabolism.isoprenoids.tocopherol... 0.02 Gene family
Smo165961 PACid_15417303 16.1.3.1 secondary metabolism.isoprenoids.tocopherol... 0.02 Gene family
Zm00001d015356 GRMZM2G088396 16.1.3.1 secondary metabolism.isoprenoids.tocopherol... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity IDA Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009507 chloroplast NAS Arabidopsis.org
BP GO:0010189 vitamin E biosynthetic process IMP Arabidopsis.org
BP GO:0010236 plastoquinone biosynthetic process IMP Arabidopsis.org
BP GO:0016117 carotenoid biosynthetic process IMP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 251 407
No external refs found!