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  5. Nbi_g08847

Nbi_g08847


Description : plant-specific E3 ubiquitin ligase *(RSL/RFA) & original description: none


Gene families : OG0000695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08847

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00118770 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G37560 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g01825 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.20 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g20802 No alias plant-specific E3 ubiquitin ligase *(RSL/RFA) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e022192_P001 Zm00001e022192 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species
Zm00001e023931_P002 Zm00001e023931 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 160 273
IPR002867 IBR_dom 449 504
IPR002867 IBR_dom 360 435
IPR000571 Znf_CCCH 561 586
No external refs found!