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  5. Nbi_g08728

Nbi_g08728


Description : not classified & original description: none


Gene families : OG0000927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08728
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT5G48590 No alias Protein of unknown function (DUF760) 0.03 OrthoFinder output from all 47 species
Aev_g40121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09381 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g01714 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0048.g030627 No alias not classified & original description: CDS=5-1237 0.04 OrthoFinder output from all 47 species
Cba_g32030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G064800.1 Ceric.07G064800 not classified & original description: pacid=50625975... 0.05 OrthoFinder output from all 47 species
Ceric.14G062400.1 Ceric.14G062400 not classified & original description: pacid=50634142... 0.08 OrthoFinder output from all 47 species
Ehy_g20230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24592 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo82738 No alias UV-B-induced protein At3g17800, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g28943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e021482_P001 Zm00001e021482 UV-B-induced protein At3g17800, chloroplastic... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 138 264
No external refs found!