AT1G04240 (IAA3, SHY2)

Aliases : IAA3, SHY2

Description : AUX/IAA transcriptional regulator family protein

Gene families : OG_01_0000129 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000129_tree ,
OG_02_0000051 (LandPlants) Phylogenetic Tree(s): OG_02_0000051_tree ,
OG_03_0000110 (SeedPlants) Phylogenetic Tree(s): OG_03_0000110_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04240
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00266760	evm_27.TU.AmTr_v1...	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00122p00019410	evm_27.TU.AmTr_v1...	Auxin-induced protein 22D OS=Vigna radiata var. radiata	0.03	Archaeplastida
AT1G04250	AXR3, IAA17	AUX/IAA transcriptional regulator family protein	0.03	Archaeplastida
AT4G14560	IAA1, AXR5	indole-3-acetic acid inducible	0.03	Archaeplastida
GSVIVT01000721001	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana	0.06	Archaeplastida
LOC_Os03g43400.1	No alias	Auxin-responsive protein IAA11 OS=Oryza sativa subsp....	0.05	Archaeplastida
LOC_Os03g43410.1	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os03g53150.1	No alias	Auxin-responsive protein IAA13 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os05g14180.1	No alias	Auxin-responsive protein IAA17 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os06g22870.1	No alias	Auxin-responsive protein IAA21 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os07g08460.1	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.03	Archaeplastida
MA_10431093g0030	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.02	Archaeplastida
Solyc06g008590.3.1	No alias	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc09g083290.3.1	No alias	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Zm00001e005073_P001	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.02	Archaeplastida
Zm00001e011863_P002	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e018053_P002	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp....	0.03	Archaeplastida
AT1G04250	AXR3, IAA17	AUX/IAA transcriptional regulator family protein	0.03	LandPlants
Gb_13092	No alias	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana...	0.02	LandPlants
LOC_Os03g43410.1	No alias	Auxin-responsive protein IAA12 OS=Oryza sativa subsp....	0.02	LandPlants
LOC_Os07g08460.1	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.03	LandPlants
Solyc09g083290.3.1	No alias	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana...	0.06	LandPlants
Zm00001e011863_P002	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.02	LandPlants
AT1G04250	AXR3, IAA17	AUX/IAA transcriptional regulator family protein	0.03	SeedPlants
LOC_Os03g43400.1	No alias	Auxin-responsive protein IAA11 OS=Oryza sativa subsp....	0.01	SeedPlants
LOC_Os12g40900.1	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.01	SeedPlants
Solyc09g083290.3.1	No alias	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana...	0.06	SeedPlants
Solyc12g007230.2.1	No alias	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana...	0.03	SeedPlants
Zm00001e011863_P002	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009741	response to brassinosteroid	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	IEP	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	44	186

External Links

No external refs found!

AT1G04240 (IAA3, SHY2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation