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  5. Nbi_g08627

Nbi_g08627 (TIL1, POL2A, ABO4,...)


Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529

Description : catalytic component *(POL2/POLE1) of DNA polymerase epsilon complex & original description: none


Gene families : OG0005358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08627

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.16 OrthoFinder output from all 47 species
AMTR_s00040p00177210 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.12 OrthoFinder output from all 47 species
Als_g16530 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.15 OrthoFinder output from all 47 species
Aspi01Gene24972.t1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.05 OrthoFinder output from all 47 species
Ceric.10G003400.1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.22 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.30 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.31 TIL2, POL2B DNA polymerase epsilon catalytic subunit A... 0.02 OrthoFinder output from all 47 species
Cre03.g179961 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
Dac_g06701 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.14 OrthoFinder output from all 47 species
Dcu_g42121 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.24 OrthoFinder output from all 47 species
GSVIVT01031365001 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Gb_06608 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.14 OrthoFinder output from all 47 species
LOC_Os02g30800.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.07 OrthoFinder output from all 47 species
Len_g09288 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.11 OrthoFinder output from all 47 species
Lfl_g39596 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
MA_10433902g0010 TIL1, POL2A,... DNA polymerase epsilon catalytic subunit A... 0.06 OrthoFinder output from all 47 species
MA_80165g0010 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.13 OrthoFinder output from all 47 species
MA_88369g0010 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.11 OrthoFinder output from all 47 species
Mp3g08150.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.01 OrthoFinder output from all 47 species
Msp_g32528 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
Smo442263 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.03 OrthoFinder output from all 47 species
Spa_g06995 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.14 OrthoFinder output from all 47 species
Tin_g44285 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.2 OrthoFinder output from all 47 species
Zm00001e014636_P002 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 108 438
IPR006134 DNA-dir_DNA_pol_B_multi_dom 804 1094
IPR013697 DNA_pol_e_suA_C 1586 1945
No external refs found!