AT1G04360


Description : RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G04360
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT1G49230 No alias RING/U-box superfamily protein 0.05 Gene family
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G10910 No alias RING/U-box superfamily protein 0.04 Gene family
AT4G09120 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G09130 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 Gene family
AT4G35840 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G05280 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G06490 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.05 Gene family
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.04 Gene family
Cpa|evm.model.tig00020943.22 No alias No description available 0.01 Gene family
GSVIVT01008754001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01009096001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01026703001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01027769001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01032684001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.02 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os02g15080 Os02g0248900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os03g05560 Os03g0149700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os03g05570 Os03g0149800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.03 Gene family
LOC_Os03g44642 No alias No description available 0.03 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49700 Os04g0586700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g08820 Os06g0187300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.02 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.05 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.02 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.03 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os09g37050 Os09g0542600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
MA_10021g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_10260361g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_126287g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_227897g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_634100g0010 No alias No description available 0.01 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_94359g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.02 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.02 Gene family
Solyc03g114190.1.1 Solyc03g114190.1 No description available 0.07 Gene family
Solyc03g123680.1.1 Solyc03g123680.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc04g074790.2.1 Solyc04g074790.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc04g074820.2.1 Solyc04g074820.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.03 Gene family
Solyc06g064440.3.1 Solyc06g064440.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc09g066300.2.1 Solyc09g066300.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc10g081790.1.1 Solyc10g081790.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc11g005320.1.1 Solyc11g005320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc12g087860.2.1 Solyc12g087860.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc12g094690.1.1 Solyc12g094690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.03 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d014949 GRMZM2G053707 No description available 0.02 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.03 Gene family
Zm00001d016142 GRMZM2G324111 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d016840 GRMZM2G460958 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d017678 GRMZM2G004480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.04 Gene family
Zm00001d037300 GRMZM2G324375 No description available 0.03 Gene family
Zm00001d038757 GRMZM2G101559 No description available 0.03 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.05 Gene family
Zm00001d047507 GRMZM2G055827 No description available 0.02 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d051894 GRMZM2G146228 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.09 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Arabidopsis.org
MF GO:0008270 zinc ion binding ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 133 176
No external refs found!