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  5. MA_47626g0010

MA_47626g0010


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG_01_0000561 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000561_tree ,
OG_02_0000421 (LandPlants) Phylogenetic Tree(s): OG_02_0000421_tree ,
OG_03_0001423 (SeedPlants) Phylogenetic Tree(s): OG_03_0001423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_47626g0010
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.15 Archaeplastida
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.15 Archaeplastida
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.13 Archaeplastida
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 Archaeplastida
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.08 Archaeplastida
Cre02.g120100 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.08 Archaeplastida
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 Archaeplastida
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 Archaeplastida
LOC_Os12g17600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.13 Archaeplastida
LOC_Os12g19381.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 Archaeplastida
LOC_Os12g19470.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 Archaeplastida
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Mp4g06030.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Mp4g09890.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 Archaeplastida
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 Archaeplastida
Pp3c12_11880V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.01 Archaeplastida
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.18 Archaeplastida
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.09 Archaeplastida
Pp3c13_16000V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.06 Archaeplastida
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.1 Archaeplastida
Pp3c3_18750V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.04 Archaeplastida
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.08 Archaeplastida
Pp3c4_13260V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.01 Archaeplastida
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.09 Archaeplastida
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 Archaeplastida
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 Archaeplastida
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 Archaeplastida
Zm00001e009125_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e024168_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.11 LandPlants
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.14 LandPlants
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 LandPlants
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.11 LandPlants
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.07 LandPlants
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 LandPlants
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 LandPlants
LOC_Os12g17600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 LandPlants
LOC_Os12g19381.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 LandPlants
LOC_Os12g19470.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 LandPlants
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 LandPlants
Mp4g06030.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 LandPlants
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 LandPlants
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 LandPlants
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 LandPlants
Mp4g15080.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 LandPlants
Pp3c12_11880V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.01 LandPlants
Pp3c13_15800V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.16 LandPlants
Pp3c13_15980V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.08 LandPlants
Pp3c13_16000V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.05 LandPlants
Pp3c3_12530V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.01 LandPlants
Pp3c3_14510V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.07 LandPlants
Pp3c3_18750V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.02 LandPlants
Pp3c3_20140V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.07 LandPlants
Pp3c4_13260V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.01 LandPlants
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 LandPlants
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 LandPlants
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 LandPlants
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 LandPlants
Zm00001e009125_P001 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e024168_P001 No alias no hits & (original description: none) 0.09 LandPlants
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.11 SeedPlants
AT1G67090 RBCS1A ribulose bisphosphate carboxylase small chain 1A 0.14 SeedPlants
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 SeedPlants
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.1 SeedPlants
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.07 SeedPlants
GSVIVT01008288001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 SeedPlants
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 SeedPlants
LOC_Os12g17600.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 SeedPlants
LOC_Os12g19381.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 SeedPlants
LOC_Os12g19470.2 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 SeedPlants
Solyc02g063150.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.09 SeedPlants
Solyc02g085950.4.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 SeedPlants
Solyc03g034220.3.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 SeedPlants
Zm00001e009125_P001 No alias no hits & (original description: none) 0.08 SeedPlants
Zm00001e024168_P001 No alias no hits & (original description: none) 0.09 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000894 RuBisCO_sc_dom 84 191
No external refs found!