AT1G03680 (ATHM1, THM1, TRX-M1, ATM1)


Aliases : ATHM1, THM1, TRX-M1, ATM1

Description : thioredoxin M-type 1


Gene families : OG_01_0000568 (Gene family) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G03680
Cluster HCCA cluster: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010012001 No alias 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.07 Gene family
GSVIVT01014360001 No alias 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.07 Gene family
GSVIVT01026149001 No alias 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.07 Gene family
LOC_Os04g57930 Os04g0676100 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.08 Gene family
LOC_Os12g08730 Os12g0188700 21.1 redox.thioredoxin chloroplast localized... 0.07 Gene family
MA_10433314g0010 No alias 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.01 Gene family
MA_474303g0010 No alias 21.1 redox.thioredoxin chloroplast localized... 0.05 Gene family
Smo230724 PACid_15416135 21.1 redox.thioredoxin chloroplast localized... 0.04 Gene family
Solyc07g063190.3.1 Solyc07g063190.3 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.04 Gene family
Solyc10g006970.3.1 Solyc10g006970.3 21.1 redox.thioredoxin encodes a chloroplast thioredoxin... 0.07 Gene family
Solyc12g013810.2.1 Solyc12g013810.2 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.19 Gene family
Zm00001d001843 GRMZM2G436199 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.1 Gene family
Zm00001d003667 GRMZM2G131202 21.1 redox.thioredoxin chloroplast protein similar to... 0.02 Gene family
Zm00001d017379 GRMZM2G170008 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.02 Gene family
Zm00001d023707 GRMZM2G181258 21.1 redox.thioredoxin encodes a prokaryotic thioredoxin... 0.14 Gene family
Zm00001d041804 GRMZM2G358009 21.1 redox.thioredoxin chloroplast localized... 0.11 Gene family

Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process RCA Arabidopsis.org
MF GO:0004857 enzyme inhibitor activity IDA Arabidopsis.org
BP GO:0006098 pentose-phosphate shunt RCA Arabidopsis.org
BP GO:0006109 regulation of carbohydrate metabolic process IDA Arabidopsis.org
BP GO:0006364 rRNA processing RCA Arabidopsis.org
BP GO:0006979 response to oxidative stress IGI Arabidopsis.org
MF GO:0008047 enzyme activator activity IDA Arabidopsis.org
BP GO:0009409 response to cold IEP Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
CC GO:0009579 thylakoid IDA Arabidopsis.org
BP GO:0009657 plastid organization RCA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0009965 leaf morphogenesis RCA Arabidopsis.org
BP GO:0010027 thylakoid membrane organization RCA Arabidopsis.org
BP GO:0010207 photosystem II assembly RCA Arabidopsis.org
CC GO:0010319 stromule IDA Arabidopsis.org
BP GO:0019252 starch biosynthetic process RCA Arabidopsis.org
BP GO:0030154 cell differentiation RCA Arabidopsis.org
BP GO:0042742 defense response to bacterium RCA Arabidopsis.org
BP GO:0043085 positive regulation of catalytic activity IDA Arabidopsis.org
BP GO:0043085 positive regulation of catalytic activity RCA Arabidopsis.org
BP GO:0043086 negative regulation of catalytic activity IDA Arabidopsis.org
BP GO:0045893 positive regulation of transcription, DNA-templated RCA Arabidopsis.org
CC GO:0048046 apoplast IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 78 176
No external refs found!