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  5. Nbi_g08424

Nbi_g08424


Description : cell cycle replicated DNA checkpoint protein *(TopBP1) & original description: none


Gene families : OG0008047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08424

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00057240 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
Ceric.15G070200.1 Ceric.15G070200 cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028102001 No alias Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
Gb_07881 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.04 OrthoFinder output from all 47 species
Gb_07883 No alias BRCT domain-containing protein At4g02110 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_39610 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.04 OrthoFinder output from all 47 species
Gb_39611 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_100135g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_929730g0010 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.02 OrthoFinder output from all 47 species
Mp5g23040.1 No alias cell cycle replicated DNA checkpoint protein (TopBP1) 0.05 OrthoFinder output from all 47 species
Spa_g06915 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.04 OrthoFinder output from all 47 species
Tin_g13316 No alias cell cycle replicated DNA checkpoint protein *(TopBP1) &... 0.07 OrthoFinder output from all 47 species
Zm00001e035929_P001 Zm00001e035929 cell cycle replicated DNA checkpoint protein (TopBP1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001357 BRCT_dom 115 178
IPR019787 Znf_PHD-finger 1101 1152
IPR001357 BRCT_dom 855 921
IPR001357 BRCT_dom 13 87
No external refs found!