AT1G02370


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000285 (Gene family) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G02370
Cluster HCCA cluster: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01002065001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
GSVIVT01014363001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
LOC_Os07g40750 Os07g0598500 27.3.67 RNA.regulation of transcription.putative... 0.06 Gene family
MA_7558g0010 No alias 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc01g079320.3.1 Solyc01g079320.3 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc02g078330.3.1 Solyc02g078330.3 27.3.67 RNA.regulation of transcription.putative... 0.07 Gene family
Solyc02g078350.3.1 Solyc02g078350.3 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc06g005140.3.1 Solyc06g005140.3 No description available 0.05 Gene family
Zm00001d009122 GRMZM2G143777 27.3.67 RNA.regulation of transcription.putative... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
BP GO:0006626 protein targeting to mitochondrion RCA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 210 238
IPR002885 Pentatricopeptide_repeat 350 377
IPR002885 Pentatricopeptide_repeat 243 270
IPR002885 Pentatricopeptide_repeat 173 202
IPR002885 Pentatricopeptide_repeat 280 307
No external refs found!