Nbi_g08398


Description : not classified & original description: none


Gene families : OG0001211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08398

tooltip/1509347">M-4.26
Target Alias Description ECC score Gene Family Method Actions
Azfi_s0590.g078725 No alias not classified & original description: CDS=218-1081 0.04 OrthoFinder output from all 47 species
Cba_g50385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z039100.1 Ceric.1Z039100 not classified & original description: pacid=50569357... 0.04 OrthoFinder output from all 47 species
Ceric.1Z039600.1 Ceric.1Z039600 not classified & original description: pacid=50569353... 0.04 OrthoFinder output from all 47 species
Ceric.1Z118700.1 Ceric.1Z118700 not classified & original description: pacid=50604678... 0.05 OrthoFinder output from all 47 species
Ceric.1Z172000.1 Ceric.1Z172000 not classified & original description: pacid=50637095... 0.05 OrthoFinder output from all 47 species
Ceric.1Z252100.1 Ceric.1Z252100 not classified & original description: pacid=50582110... 0.04 OrthoFinder output from all 47 species
Ceric.39G051700.1 Ceric.39G051700 not classified & original description: pacid=50582866... 0.09 OrthoFinder output from all 47 species
Ceric.39G051800.1 Ceric.39G051800 not classified & original description: pacid=50582763... 0.04 OrthoFinder output from all 47 species
Ceric.39G052100.1 Ceric.39G052100 not classified & original description: pacid=50583186... 0.04 OrthoFinder output from all 47 species
Dac_g34744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g15055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g02120.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g05710.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g15964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024638 No alias not classified & original description: CDS=1-822 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019587 Polyketide_cyclase/dehydratase 61 170
No external refs found!