AT1G01060 (LHY1, LHY)


Aliases : LHY1, LHY

Description : Homeodomain-like superfamily protein


Gene families : OG_01_0007396 (Gene family) Phylogenetic Tree(s): OG0007396_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G01060
Cluster HCCA cluster: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027456001 No alias 27.3.26 RNA.regulation of transcription.MYB-related... 0.08 Gene family
Smo166821 PACid_15419362 No description available 0.06 Gene family
Solyc10g005080.3.1 Solyc10g005080.3 27.3.26 RNA.regulation of transcription.MYB-related... 0.12 Gene family
Zm00001d024546 GRMZM2G474769 27.3.26 RNA.regulation of transcription.MYB-related... 0.05 Gene family
Zm00001d049543 GRMZM2G014902 27.3.26 RNA.regulation of transcription.MYB-related... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity IDA Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated RCA Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated TAS Arabidopsis.org
BP GO:0007623 circadian rhythm IGI Arabidopsis.org
BP GO:0007623 circadian rhythm RCA Arabidopsis.org
BP GO:0009409 response to cold IGI Arabidopsis.org
BP GO:0009639 response to red or far red light RCA Arabidopsis.org
BP GO:0009651 response to salt stress IEP Arabidopsis.org
BP GO:0009651 response to salt stress RCA Arabidopsis.org
BP GO:0009723 response to ethylene IEP Arabidopsis.org
BP GO:0009723 response to ethylene RCA Arabidopsis.org
BP GO:0009733 response to auxin IEP Arabidopsis.org
BP GO:0009733 response to auxin RCA Arabidopsis.org
BP GO:0009737 response to abscisic acid IEP Arabidopsis.org
BP GO:0009737 response to abscisic acid RCA Arabidopsis.org
BP GO:0009739 response to gibberellin IEP Arabidopsis.org
BP GO:0009739 response to gibberellin RCA Arabidopsis.org
BP GO:0009751 response to salicylic acid IEP Arabidopsis.org
BP GO:0009751 response to salicylic acid RCA Arabidopsis.org
BP GO:0009753 response to jasmonic acid IEP Arabidopsis.org
BP GO:0009753 response to jasmonic acid RCA Arabidopsis.org
BP GO:0042752 regulation of circadian rhythm IMP Arabidopsis.org
BP GO:0042752 regulation of circadian rhythm RCA Arabidopsis.org
BP GO:0042754 negative regulation of circadian rhythm IMP Arabidopsis.org
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IMP Arabidopsis.org
MF GO:0044212 transcription regulatory region DNA binding IDA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
BP GO:0048574 long-day photoperiodism, flowering IGI Arabidopsis.org
BP GO:0048574 long-day photoperiodism, flowering RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 24 67
No external refs found!